Helpful Links

Here are just a few helpful links that may help

Cyverse

• Cyverse

VirtualBox

VirtualBox will allow you to run your own virtual machine (CyVerse is for running it on another server)

• VirtualBox

Assembly and Homology

• Trinity
• Yang and Smith Phylogenomic Dataset BitBucket

Tree things

• RAxML
• RAxML-NG
• IQTREE
• ASTRAL